STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8258KEGG: bsu:BSU35950 ribose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family. (374 aa)    
Predicted Functional Partners:
Sros_8259
KEGG: spe:Spro_1962 ABC transporter-related protein.
 0.997
rbsA
ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.990
Sros_1401
KEGG: cvi:CV_3016 ribose ABC transporter, substrate binding protein.
 0.990
Sros_2416
KEGG: acr:Acry_2781 ABC transporter related.
 0.985
Sros_8257
KEGG: mlo:mll1012 periplasmic ribose-binding protein.
 
 0.985
Sros_7477
KEGG: ara:Arad_9553 sugar ABC transporter.
 0.973
Sros_8213
KEGG: bxe:Bxe_B2964 ABC sugar transporter, periplasmic ligand binding protein.
 0.968
Sros_2417
KEGG: acr:Acry_1070 ABC-type sugar transport system periplasmic component-like protein.
 
 0.947
Sros_6222
KEGG: bja:blr3201 sugar ABC transporter ATP-binding protein.
 
 0.936
Sros_7476
KEGG: cvi:CV_3018 D-ribose transport system ATP- binding protein.
 
 0.936
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.