STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8284KEGG: sus:Acid_5307 alpha-ketoglutarate decarboxylase. (1241 aa)    
Predicted Functional Partners:
Sros_0616
KEGG: nwi:Nwi_1813 dihydrolipoamide dehydrogenase.
  
 0.999
Sros_2207
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; KEGG: nmu:Nmul_A0856 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase.
 
 0.999
Sros_2644
KEGG: sus:Acid_0914 dihydrolipoyllysine-residue succinyltransferase.
 
0.999
Sros_2645
KEGG: mxa:MXAN_4219 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase.
 
 0.999
Sros_6420
KEGG: hch:HCH_06123 2-oxoisovalerate dehydrogenase.
  
 0.999
Sros_6845
KEGG: cko:CKO_03853 hypothetical protein.
 
 0.999
Sros_1285
KEGG: msl:Msil_0522 dihydrolipoamide dehydrogenase.
 
 0.998
Sros_6317
KEGG: aca:ACP_2380 soluble pyridine nucleotide transhydrogenase.
 
 0.997
Sros_5380
KEGG: aba:Acid345_0466 carbamoyl-phosphate synthase L chain, ATP-binding.
  
 0.996
Sros_5411
KEGG: gme:Gmet_1148 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.996
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.