STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8285Hypothetical protein. (58 aa)    
Predicted Functional Partners:
Sros_7273
Conserved hypothetical protein; KEGG: pca:Pcar_2585 Fe-S oxidoreductase.
  
     0.761
Sros_7274
KEGG: pca:Pcar_2585 Fe-S oxidoreductase.
  
     0.716
Sros_8284
KEGG: sus:Acid_5307 alpha-ketoglutarate decarboxylase.
       0.701
Sros_8286
KEGG: smt:Smal_2940 hypothetical protein.
       0.692
Sros_8287
KEGG: psp:PSPPH_3923 PadR family transcriptional regulator.
       0.692
Sros_2652
Hypothetical protein.
  
     0.617
Sros_2855
KEGG: cko:CKO_02147 putative metallothionein SmtA.
  
     0.567
Sros_2345
Hypothetical protein; KEGG: dol:Dole_0326 antibiotic biosynthesis monooxygenase.
  
     0.460
Sros_2575
Hypothetical protein.
  
     0.454
Sros_8007
KEGG: hypothetical protein.
  
     0.450
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.