STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8321KEGG: gme:Gmet_0018 metal dependent phosphohydrolase. (451 aa)    
Predicted Functional Partners:
Sros_7359
KEGG: maq:Maqu_0096 diguanylate cyclase with PAS/PAC sensor.
 
 0.981
Sros_8060
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein; KEGG: ppd:Ppro_2997 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s).
 
 0.891
Sros_8319
Response regulator receiver protein; KEGG: gsu:GSU1007 GAF domain/HD domain-containing protein.
 
  
0.891
Sros_8076
Signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like protein; KEGG: mpt:Mpe_A0214 diguanylate cyclase/phosphodiesterase.
 
  
 0.773
Sros_8320
Hypothetical protein.
       0.773
Sros_1009
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: sfu:Sfum_2453 serine phosphatase.
 
   
 0.668
Sros_0401
KEGG: pzu:PHZ_c2079 sensor histidine kinase/response regulator.
 
 
 0.646
Sros_1943
KEGG: afw:Anae109_0540 GAF sensor hybrid histidine kinase.
  
 
 0.646
Sros_8323
Hypothetical protein; KEGG: tgr:Tgr7_1713 putative transmembrane anti- sigma factor.
       0.550
Sros_7544
Signal transduction histidine kinase-like protein; KEGG: bra:BRADO5752 sensor histidine kinase.
    
 0.534
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.