STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8348KEGG: xac:XAC1843 hypothetical protein. (181 aa)    
Predicted Functional Partners:
Sros_8347
Conserved hypothetical protein.
  
    0.787
Sros_1379
Coenzyme F420-0 gamma-glutamyl ligase; KEGG: bpy:Bphyt_4255 F420-dependent oxidoreductase.
      0.591
Sros_8346
Nucleoside-diphosphate-sugar epimerase-like protein; KEGG: dal:Dalk_1637 NAD-dependent epimerase/dehydratase.
  
    0.566
Sros_8349
KEGG: bcs:BCAN_A0638 hypothetical protein.
       0.559
Sros_8884
KEGG: scl:sce0154 hypothetical protein.
  
     0.410
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.