STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8364KEGG: xcv:XCV3308 putative siderophore biosynthesis protein. (545 aa)    
Predicted Functional Partners:
Sros_8363
KEGG: reh:PHG125 putative siderophore biosynthesis protein.
 
   
 0.961
Sros_8365
KEGG: reh:PHG122 putative iron transport protein.
 
     0.961
Sros_8366
KEGG: pol:Bpro_4782 Orn/DAP/Arg decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 0.951
Sros_3463
L-lysine 6-monooxygenase (NADPH); KEGG: bur:Bcep18194_A4789 lysine/ornithine N- monooxygenase.
  
  
 0.782
Sros_8401
KEGG: hypothetical protein LOC739882.
  
     0.737
Sros_0911
KEGG: shn:Shewana3_1825 ATPase-like protein.
  
     0.735
Sros_9326
Putative transcriptional regulator, XRE family; KEGG: ank:AnaeK_0453 MJ0042 family finger-like protein.
  
     0.727
Sros_2570
Hypothetical protein; KEGG: baa:BA_2243 HTH_XRE, helix-turn-helix XRE- family like proteins.
  
     0.723
Sros_1071
Hypothetical protein.
  
     0.715
Sros_5721
KEGG: ade:Adeh_3797 hypothetical protein.
  
     0.709
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.