STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8407KEGG: bur:Bcep18194_A5670 hypothetical protein. (314 aa)    
Predicted Functional Partners:
Sros_5129
KEGG: jan:Jann_2411 hypothetical protein.
 
     0.611
Sros_7774
KEGG: jan:Jann_2411 hypothetical protein.
 
     0.584
Sros_2338
KEGG: bbr:BB0827 hypothetical protein.
 
     0.577
Sros_1957
Putative transcriptional regulator, PucR family; KEGG: pag:PLES_34081 putative regulatory protein.
  
     0.561
Sros_8408
KEGG: gur:Gura_2041 MgtE intracellular region.
       0.547
Sros_8409
Membrane protein-like protein; KEGG: gsu:GSU2763 hypothetical protein.
       0.547
Sros_7788
KEGG: gsu:GSU0574 hypothetical protein.
 
     0.544
Sros_5289
KEGG: avi:Avi_7502 regulator protein PecM.
  
     0.492
Sros_6164
KEGG: bbr:BB0827 hypothetical protein.
 
     0.456
Sros_3314
KEGG: nme:NMB0065 hypothetical protein.
  
     0.444
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.