STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8453ABC-type multidrug transport system ATPase and permease components-like protein; KEGG: bsu:BSU09710 hypothetical protein. (564 aa)    
Predicted Functional Partners:
Sros_8452
KEGG: hch:HCH_00144 ABC-type multidrug transport system, ATPase and permease components.
 
    
0.713
Sros_6439
KEGG: rsk:RSKD131_4558 ABC transporter related.
 
 
 0.688
Sros_2561
KEGG: afw:Anae109_1963 ABC transporter related.
 
    
0.602
Sros_8454
Hypothetical protein.
 
     0.590
Sros_8049
KEGG: afw:Anae109_1773 hypothetical protein.
 
     0.563
Sros_0397
KEGG: scl:sce7656 carbohydrate ABC transporter.
 
    
0.553
Sros_6679
Hypothetical protein; KEGG: scl:sce2632 calcineurin-like phosphoesterase family protein.
  
 
   0.541
Sros_6266
KEGG: acr:Acry_1699 hypothetical protein.
  
     0.540
Sros_8050
ABC-type transport system involved in lipoprotein release permease component-like protein; KEGG: afw:Anae109_1773 hypothetical protein.
 
     0.534
Sros_8455
KEGG: CLPC1; chaperone, Hsp100 family, ClpC-type; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC.
       0.520
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.