STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8471Hypothetical protein; KEGG: bpm:BURPS1710b_1102 putative lipoprotein. (812 aa)    
Predicted Functional Partners:
Sros_8472
KEGG: bsu:BSU04940 hypothetical protein.
 
    0.961
Sros_8469
Cell wall-associated hydrolase (invasion- associated protein)-like protein; KEGG: bar:GBAA_pXO2_0007 NLP/P60 family protein, (pXO2-08).
 
     0.851
Sros_8473
ATPase involved in chromosome partitioning-like protein; KEGG: Hypothetical protein CBG02561.
 
     0.824
Sros_8470
Hypothetical protein.
       0.794
Sros_8466
KEGG: Prb1; proline-rich protein BstNI subfamily 1.
 
     0.776
Sros_0545
Hypothetical protein; KEGG: GK17443 gene product from transcript GK17443- RA.
  
    0.775
Sros_5968
KEGG: scl:sce1864 hypothetical protein.
  
     0.772
Sros_7091
Hypothetical protein.
  
     0.772
Sros_8401
KEGG: hypothetical protein LOC739882.
  
     0.772
Sros_7331
Hypothetical protein; KEGG: sbp:Sbal223_2107 NERD domain protein.
  
     0.770
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.