STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8497KEGG: ade:Adeh_2233 GntR family transcriptional regulator. (481 aa)    
Predicted Functional Partners:
Sros_8498
KEGG: bpm:BURPS1710b_2142 putative transmembrane protein.
     
 0.587
Sros_7671
KEGG: aba:Acid345_2785 hypothetical protein.
 
    0.565
Sros_5541
KEGG: aba:Acid345_2785 hypothetical protein.
 
    0.531
Sros_8493
KEGG: sus:Acid_1482 hypothetical protein.
       0.508
Sros_8494
KEGG: sus:Acid_1481 ribokinase-like domain- containing protein.
       0.508
Sros_8495
Myo-inosose-2 dehydratase; KEGG: kpe:KPK_2564 AP endonuclease, family 2.
       0.508
Sros_8496
KEGG: bme:BMEII0574 myo-inositol 2-dehydrogenase.
       0.508
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.