STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8542KEGG: eli:ELI_11345 membrane carboxypeptidase. (724 aa)    
Predicted Functional Partners:
Sros_2878
Hypothetical protein; KEGG: bha:BH2546 cell-division initiation protein (septum placement).
   
 
 0.914
Sros_2869
KEGG: mgm:Mmc1_0754 cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.767
Sros_7278
KEGG: bba:Bd2461 rod shape-determining protein; Belongs to the SEDS family.
 
 
 
 0.739
mltG
Periplasmic solute-binding protein-like protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
 
   
 0.729
mltG-2
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
 
   
 0.729
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.709
Sros_6355
KEGG: azo:azo3774 putative serine/threonine protein kinase.
   
 
 0.702
mraY
Phospho-N-acetylmuramoyl-pentapeptide-transferas e; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.688
Sros_1441
Cell division protein FtsI/penicillin-binding protein 2-like protein; KEGG: mxa:MXAN_7139 putative penicillin-binding protein.
 
 
 
 0.673
Sros_0114
KEGG: glo:Glov_0671 cell division protein FtsW; Belongs to the SEDS family.
 
 
 
 0.649
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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