STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8558KEGG: afw:Anae109_4044 hypothetical protein. (398 aa)    
Predicted Functional Partners:
Sros_8557
KEGG: mlo:mlr7234 glucose kinase.
       0.778
Sros_5968
KEGG: scl:sce1864 hypothetical protein.
  
     0.614
Sros_8560
KEGG: aba:Acid345_3257 von Willebrand factor, type A.
 
     0.611
Sros_8559
KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase, putative.
       0.570
Sros_7089
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: mrd:Mrad2831_2672 multi-sensor hybrid histidine kinase.
  
     0.567
Sros_1009
Serine phosphatase RsbU regulator of sigma subunit-like protein; KEGG: sfu:Sfum_2453 serine phosphatase.
  
     0.561
Sros_8472
KEGG: bsu:BSU04940 hypothetical protein.
  
     0.539
Sros_1251
KEGG: ade:Adeh_3741 FHA domain-containing protein.
  
     0.508
Sros_0495
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: bsu:BSU04720 serine-protein kinase RsbW.
  
     0.498
Sros_8319
Response regulator receiver protein; KEGG: gsu:GSU1007 GAF domain/HD domain-containing protein.
  
     0.497
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.