STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8594KEGG: met:M446_4028 polysaccharide biosynthesis protein. (434 aa)    
Predicted Functional Partners:
Sros_8590
Uncharacterized protein involved in exopolysaccharide biosynthesis-like protein; KEGG: lch:Lcho_2366 chain length determinant protein EpsF.
 
  
 0.915
Sros_8593
KEGG: rsp:RSP_3846 putative deacetylase sulfotransferase.
 
     0.915
Sros_8592
Hypothetical protein.
 
     0.888
Sros_0630
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: acp:A2cp1_1500 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.852
Sros_0581
Hypothetical protein; KEGG: cja:CJA_0343 rhs repeat family.
 
    0.815
Sros_8598
KEGG: dol:Dole_0985 glycosyl transferase family protein.
 
  
 0.806
Sros_8589
Hypothetical protein; KEGG: rsk:RSKD131_1496 beta-mannanase precursor; Belongs to the glycosyl hydrolase 26 family.
 
     0.795
Sros_8591
Hypothetical protein.
  
  
 0.792
Sros_8595
KEGG: eli:ELI_12595 hypothetical protein.
       0.774
Sros_0631
dTDP-glucose pyrophosphorylase-like protein; KEGG: dol:Dole_1011 glucose-1-phosphate thymidylyltransferase.
  
  
 0.738
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.