STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8723Histidine kinase; KEGG: azo:azo0568 putative sensory box histidine kinase. (365 aa)    
Predicted Functional Partners:
Sros_8722
KEGG: hch:HCH_00419 response regulator.
   0.954
Sros_4051
Response regulator receiver protein; KEGG: ank:AnaeK_1881 two component transcriptional regulator, LuxR family.
   0.805
Sros_4416
Response regulator receiver protein; KEGG: tgr:Tgr7_2171 two component transcriptional regulator, LuxR family.
   0.805
Sros_2506
KEGG: psb:Psyr_1940 LuxR response regulator receiver.
   0.800
Sros_3199
Response regulator receiver protein; KEGG: tgr:Tgr7_2171 two component transcriptional regulator, LuxR family.
   0.800
Sros_6137
Response regulator receiver protein; KEGG: tgr:Tgr7_2171 two component transcriptional regulator, LuxR family.
   0.800
Sros_2300
KEGG: bha:BH3628 two-component response regulator involved in degradative enzyme.
   0.798
Sros_1653
Response regulator receiver protein; KEGG: tgr:Tgr7_2171 two component transcriptional regulator, LuxR family.
   0.797
Sros_0503
Response regulator receiver protein; KEGG: gur:Gura_0759 two component LuxR family transcriptional regulator.
   0.795
Sros_9330
KEGG: psb:Psyr_1940 LuxR response regulator receiver.
   0.794
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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