STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8786KEGG: vfm:VFMJ11_1660 ABC-type cobalt transport system, permease component. (272 aa)    
Predicted Functional Partners:
Sros_5454
BioY protein; KEGG: sit:TM1040_3659 BioY protein.
  
 0.975
Sros_8405
KEGG: mxa:MXAN_2207 BioY family protein.
  
 0.975
Sros_8787
KEGG: ppr:PBPRA2239 hypothetical protein.
  
 
 0.975
Sros_8788
KEGG: vvy:VVA0347 ABC-type cobalt transport system, ATPase component.
 
 
 0.972
Sros_0993
KEGG: gme:Gmet_2441 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
 
 0.968
Sros_0995
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.964
Sros_5457
KEGG: eta:ETA_08180 cobalt import ATP-binding protein CbiO.
  
 
 0.945
Sros_8789
KEGG: sfu:Sfum_0366 adenosylhomocysteinase.
       0.773
Sros_8790
S-adenosylhomocysteine hydrolase-like protein; KEGG: hypothetical protein.
       0.773
Sros_5595
Precorrin-3B methylase-like protein; KEGG: bac:BamMC406_1589 precorrin-3B C17- methyltransferase.
  
  
 0.609
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.