STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8790S-adenosylhomocysteine hydrolase-like protein; KEGG: hypothetical protein. (191 aa)    
Predicted Functional Partners:
Sros_8788
KEGG: vvy:VVA0347 ABC-type cobalt transport system, ATPase component.
       0.777
Sros_8786
KEGG: vfm:VFMJ11_1660 ABC-type cobalt transport system, permease component.
       0.773
Sros_8787
KEGG: ppr:PBPRA2239 hypothetical protein.
       0.773
Sros_8789
KEGG: sfu:Sfum_0366 adenosylhomocysteinase.
       0.773
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
 
 0.638
Sros_8785
Amidohydrolase; KEGG: glo:Glov_0961 amidohydrolase.
  
    0.596
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.564
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.557
Sros_8784
Hypothetical protein; KEGG: lch:Lcho_0275 histidine kinase.
       0.470
Sros_6013
Tkt1; KEGG: dat:HRM2_48140 Tkt1; Belongs to the transketolase family.
  
 
 0.456
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.