STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8882KEGG: tmz:Tmz1t_0590 protein of unknown function DUF1555. (356 aa)    
Predicted Functional Partners:
Sros_8881
KEGG: afw:Anae109_0825 NAD-dependent epimerase/dehydratase.
  
    0.522
Sros_8880
KEGG: bmt:BSUIS_B1000 hypothetical protein.
       0.516
Sros_8878
KEGG: gme:Gmet_3382 heavy metal sensor signal transduction histidine kinase.
       0.449
Sros_8879
Response regulator receiver protein; KEGG: dat:HRM2_18670 two component transcriptional regulator (winged helix family protein).
       0.449
Sros_8761
KEGG: cvi:CV_3163 hypothetical protein.
  
    0.432
Sros_3286
KEGG: hypothetical protein.
  
    0.409
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.