STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SL44-1KEGG: SL44-1; basic proline-rich protein. (572 aa)    
Predicted Functional Partners:
Sros_7139
KEGG: TP23; basic proline-rich protein.
  
     0.688
Sros_8182
KEGG: bja:blr0521 hypothetical protein.
  
     0.645
Sros_8401
KEGG: hypothetical protein LOC739882.
  
     0.617
Sros_8466
KEGG: Prb1; proline-rich protein BstNI subfamily 1.
  
     0.607
Sros_8811
KEGG: hypothetical protein.
  
     0.589
Sros_7107
KEGG: hypothetical protein LOC686639.
  
    0.538
Sros_7675
KEGG: hypothetical protein.
  
     0.526
Sros_2879
Hypothetical protein; KEGG: NACA, TEBP; nascent polypeptide-associated complex alpha subunit.
  
     0.515
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
       0.512
Sros_9326
Putative transcriptional regulator, XRE family; KEGG: ank:AnaeK_0453 MJ0042 family finger-like protein.
  
     0.509
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.