STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_8998KEGG: mxa:MXAN_5545 transcriptional regulator, TetR family. (229 aa)    
Predicted Functional Partners:
Sros_3962
Putative transcriptional regulator, TetR family; KEGG: pap:PSPA7_4161 putative transcriptional regulator.
  
     0.628
Sros_6464
KEGG: scl:sce7023 TetR family transcriptional regulator.
  
     0.531
Sros_8999
KEGG: hch:HCH_06913 transcriptional regulator.
       0.530
Sros_5721
KEGG: ade:Adeh_3797 hypothetical protein.
  
     0.480
Sros_6829
KEGG: afr:AFE_2323 hypothetical protein.
  
     0.471
Sros_8666
DNA segregation ATPase FtsK/SpoIIIE and related protein-like protein; KEGG: nis:NIS_0826 cell division protein FtsK.
  
     0.447
Sros_1629
ABC-type transport system involved in lipoprotein release permease component-like protein; KEGG: mpt:Mpe_A2068 hypothetical protein.
  
     0.431
Sros_1328
KEGG: met:M446_0921 adenylate/guanylate cyclase.
  
     0.411
Sros_1313
Hypothetical protein; KEGG: scl:sce7264 ribonuclease G.
  
     0.403
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.