Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sros_0794 | Sros_1511 | KEGG: prw:PsycPRwf_2212 phage shock protein C, PspC. | Phage shock protein A (IM30) suppresses sigma54- dependent transcription-like protein; KEGG: hypothetical protein. | 0.907 |
Sros_0794 | Sros_2656 | KEGG: prw:PsycPRwf_2212 phage shock protein C, PspC. | KEGG: afr:AFE_2017 PspA/IM30 family. | 0.845 |
Sros_0794 | Sros_7918 | KEGG: prw:PsycPRwf_2212 phage shock protein C, PspC. | KEGG: cak:Caul_0664 membrane protein of unknown function. | 0.750 |
Sros_0794 | Sros_9060 | KEGG: prw:PsycPRwf_2212 phage shock protein C, PspC. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.559 |
Sros_1228 | Sros_1229 | Signal transduction histidine kinase-like protein; KEGG: aca:ACP_2112 two component regulator propeller/histidine kinase domain protein. | KEGG: nmc:NMC1151 putative two-component system response regulator. | 0.923 |
Sros_1228 | Sros_9060 | Signal transduction histidine kinase-like protein; KEGG: aca:ACP_2112 two component regulator propeller/histidine kinase domain protein. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.723 |
Sros_1229 | Sros_1228 | KEGG: nmc:NMC1151 putative two-component system response regulator. | Signal transduction histidine kinase-like protein; KEGG: aca:ACP_2112 two component regulator propeller/histidine kinase domain protein. | 0.923 |
Sros_1229 | Sros_9060 | KEGG: nmc:NMC1151 putative two-component system response regulator. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.443 |
Sros_1511 | Sros_0794 | Phage shock protein A (IM30) suppresses sigma54- dependent transcription-like protein; KEGG: hypothetical protein. | KEGG: prw:PsycPRwf_2212 phage shock protein C, PspC. | 0.907 |
Sros_1511 | Sros_9060 | Phage shock protein A (IM30) suppresses sigma54- dependent transcription-like protein; KEGG: hypothetical protein. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.845 |
Sros_2656 | Sros_0794 | KEGG: afr:AFE_2017 PspA/IM30 family. | KEGG: prw:PsycPRwf_2212 phage shock protein C, PspC. | 0.845 |
Sros_2656 | Sros_9060 | KEGG: afr:AFE_2017 PspA/IM30 family. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.845 |
Sros_2656 | Sros_9321 | KEGG: afr:AFE_2017 PspA/IM30 family. | Hypothetical protein. | 0.500 |
Sros_6300 | Sros_9060 | DNA-directed DNA polymerase; KEGG: geo:Geob_1150 PHP domain protein. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.423 |
Sros_7193 | Sros_7918 | KEGG: pfl:PFL_6058 hypothetical protein. | KEGG: cak:Caul_0664 membrane protein of unknown function. | 0.404 |
Sros_7193 | Sros_9060 | KEGG: pfl:PFL_6058 hypothetical protein. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.447 |
Sros_7193 | Sros_9321 | KEGG: pfl:PFL_6058 hypothetical protein. | Hypothetical protein. | 0.483 |
Sros_7918 | Sros_0794 | KEGG: cak:Caul_0664 membrane protein of unknown function. | KEGG: prw:PsycPRwf_2212 phage shock protein C, PspC. | 0.750 |
Sros_7918 | Sros_7193 | KEGG: cak:Caul_0664 membrane protein of unknown function. | KEGG: pfl:PFL_6058 hypothetical protein. | 0.404 |
Sros_7918 | Sros_9060 | KEGG: cak:Caul_0664 membrane protein of unknown function. | Putative stress-responsive transcriptional regulator protein-like protein; KEGG: hypothetical protein. | 0.750 |
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