STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_9099Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. (134 aa)    
Predicted Functional Partners:
Sros_9097
Hypothetical protein; KEGG: proteophosphoglycan 5.
 
    0.904
Sros_9098
Hypothetical protein.
       0.773
Sros_8100
KEGG: xau:Xaut_2507 hypothetical protein.
  
    0.682
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
  
  
 0.671
Sros_8088
Hypothetical protein; KEGG: mpo:Mpop_4516 cell divisionFtsK/SpoIIIE.
  
    0.644
Sros_4389
KEGG: ajs:Ajs_3114 hypothetical protein.
  
     0.601
Sros_2440
KEGG: psa:PST_2112 probable ring-cleaving dioxygenase.
  
    0.528
Sros_1505
Hypothetical protein; KEGG: afw:Anae109_2499 DNA internalization-related competence protein ComEC/Rec2.
  
     0.526
Sros_8091
Hypothetical protein; KEGG: ank:AnaeK_2043 XGLTT repeat protein.
  
     0.526
Sros_8090
KEGG: prw:PsycPRwf_1946 hypothetical protein.
 
     0.512
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.