STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_9220KEGG: pca:Pcar_1692 DNA polymerase III, gamma/tau subunits. (393 aa)    
Predicted Functional Partners:
Sros_2278
KEGG: gsu:GSU2207 DNA polymerase III, delta subunit, putative.
 
 
 0.997
Sros_0002
DNA-directed DNA polymerase; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...]
 
 
 0.993
Sros_2892
KEGG: sat:SYN_00896 DNA polymerase III alpha subunit.
 
 0.992
Sros_9328
DNA-directed DNA polymerase; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of repl [...]
 
 
 0.992
Sros_2682
KEGG: cti:RALTA_B0605 DNA polymerase III, epsilon subunit + GIY-YIG endonuclease (modular protein).
 
 0.967
Sros_3860
DNA polymerase III epsilon subunit and related 3'-5' exonuclease-like protein; KEGG: lhk:LHK_02526 probable DNA-directed DNA polymerase III.
   
 0.965
Sros_9062
KEGG: tcx:Tcr_0930 DNA polymerase III, epsilon subunit.
   
 0.965
Sros_2311
KEGG: cvi:CV_4236 MerR family transcriptional regulator.
   
 0.959
dnaX
DNA-directed DNA polymerase; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
  
 
0.926
Sros_7360
KEGG: rso:RSc0422 single-strand DNA-binding protein.
 
 
 
 0.917
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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