STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sros_9362KEGG: ank:AnaeK_0174 integral membrane protein-like protein. (435 aa)    
Predicted Functional Partners:
Sros_9363
Membrane carboxypeptidase (penicillin-binding protein)-like protein; KEGG: dal:Dalk_0613 penicillin-binding protein, 1A family.
 
    0.814
Sros_9361
KEGG: geo:Geob_0329 hypothetical protein.
     0.712
Sros_1724
KEGG: noc:Noc_1207 hypothetical protein.
  
   
 0.693
Sros_0482
Hypothetical protein; KEGG: dsh:Dshi_1125 type II secretion system protein.
  
     0.678
Sros_8655
Hypothetical protein; KEGG: ank:AnaeK_2916 Flp pilus assembly protein CpaB.
  
     0.652
Sros_8078
KEGG: mxa:MXAN_1973 hypothetical protein.
  
     0.591
Sros_0903
Hypothetical protein.
  
     0.576
Sros_0479
Hypothetical protein; KEGG: pzu:PHZ_c2999 pilus assembly protein CpaE.
  
     0.546
Sros_2927
Hypothetical protein.
  
     0.546
Sros_7041
Hypothetical protein.
  
     0.511
Your Current Organism:
Streptosporangium roseum
NCBI taxonomy Id: 479432
Other names: S. roseum DSM 43021, Streptosporangium roseum DSM 43021, Streptosporangium roseum str. DSM 43021, Streptosporangium roseum strain DSM 43021
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.