STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_0127PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sma:SAV_2089 2-hydroxyacid dehydrogenase. (340 aa)    
Predicted Functional Partners:
Caci_8790
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
 
 
 0.757
Caci_0132
KEGG: sma:SAV_2106 hypothetical protein.
 
     0.721
Caci_0126
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: aau:AAur_0159 type I phosphodiesterase / nucleotide pyrophosphatase family protein.
       0.655
Caci_0137
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: tfu:Tfu_1719 hypothetical protein.
 
     0.627
Caci_0139
KEGG: sco:SCO2751 hypothetical protein.
 
    0.620
Caci_0130
PFAM: extracellular solute-binding protein family 1; KEGG: aau:AAur_1455 putative lipoprotein precursor LplA.
 
     0.616
Caci_6719
KEGG: rsa:RSal33209_0120 hypothetical protein.
 
     0.609
Caci_6545
KEGG: fal:FRAAL3674 uridine kinase.
 
 
  0.604
Caci_1593
KEGG: sgr:SGR_882 hypothetical protein.
 
     0.603
Caci_0140
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sgr:SGR_4813 putative oxidoreductase.
 
   
 0.588
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.