Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Caci_0366PFAM: protein of unknown function ATP binding; KEGG: tfu:Tfu_2447 putative ATP/GTP-binding protein. (211 aa)    
Predicted Functional Partners:
Caci_0364
PFAM: Roadblock/LC7 family protein; KEGG: sma:SAV_1632 hypothetical protein.
 
 
 0.974
Caci_0363
PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sgr:SGR_935 putative sensor-like histidine kinase.
 
  
 0.949
Caci_0365
PFAM: protein of unknown function DUF742; KEGG: sco:SCO6796 hypothetical protein.
 
  
 0.932
Caci_1061
PFAM: Roadblock/LC7 family protein; KEGG: sgr:SGR_934 hypothetical protein.
 
 
 0.899
Caci_2533
PFAM: Roadblock/LC7 family protein; KEGG: fra:Francci3_4331 hypothetical protein.
 
 
 0.893
Caci_4181
PFAM: Roadblock/LC7 family protein; KEGG: nfa:nfa23520 hypothetical protein.
 
 
 0.893
Caci_2446
PFAM: Roadblock/LC7 family protein; KEGG: sma:SAV_2180 hypothetical protein.
 
 
 0.890
Caci_3315
PFAM: Roadblock/LC7 family protein; KEGG: saq:Sare_0761 roadblock/LC7 family protein.
 
 
 0.890
Caci_3382
PFAM: Roadblock/LC7 family protein; KEGG: sma:SAV_2180 hypothetical protein.
 
 
 0.890
Caci_5184
PFAM: Roadblock/LC7 family protein; KEGG: saq:Sare_0761 roadblock/LC7 family protein.
 
 
 0.890
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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