STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_0422PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: sma:SAV_2262 serine/threonine protein kinase. (600 aa)    
Predicted Functional Partners:
Caci_0035
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: sgr:SGR_3728 putative protein phosphatase.
 
 
 0.839
Caci_9039
SMART: serine/threonine protein kinase; KEGG: sco:SCO3893 hypothetical protein.
  
     0.774
Caci_8519
Serine/threonine protein kinase; PFAM: Fibronectin type III domain protein; SMART: serine/threonine protein kinase; Fibronectin type III domain protein; KEGG: similar to gamma-aminobutyric acid A receptor, epsilon.
  
     0.771
Caci_3128
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain-containing protein.
 
 
 
 0.686
Caci_6001
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: sma:SAV_6092 serine/threonine protein kinase.
 
 
0.600
Caci_0103
FHA domain containing protein; PFAM: Forkhead-associated protein; protein of unknown function DUF1707; SMART: Forkhead-associated protein; KEGG: sma:SAV_2158 hypothetical protein.
 
 
 
 0.585
Caci_0423
KEGG: sma:SAV_6625 hypothetical protein.
       0.510
Caci_0424
PFAM: oxidoreductase molybdopterin binding; KEGG: sma:SAV_6624 hypothetical protein.
       0.510
Caci_0421
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sco:SCO1356 iron sulphur protein (secreted protein).
       0.481
Caci_2647
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: sgr:SGR_3730 hypothetical protein.
 
 
 
 0.461
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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