STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_0550PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: dac:Daci_4506 acyl-CoA dehydrogenase domain- containing protein. (377 aa)    
Predicted Functional Partners:
Caci_0551
KEGG: dac:Daci_4507 hypothetical protein.
 
    0.891
Caci_2473
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ace:Acel_0685 electron transfer flavoprotein, alpha subunit.
 
 0.779
Caci_0552
KEGG: dac:Daci_4508 hypothetical protein.
       0.777
Caci_5360
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: fal:FRAAL3134 putative acyl-CoA dehydrogenase.
  
     0.773
Caci_2175
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mav:MAV_1336 acyl-CoA dehydrogenase, C-domain protein.
  
     0.768
Caci_1360
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: fal:FRAAL2829 putative acyl-CoA dehydrogenase.
  
     0.766
Caci_6286
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: fal:FRAAL3503 putative acyl-CoA dehydrogenase.
  
     0.766
Caci_1298
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: fal:FRAAL5877 electron transfer flavoprotein subunit alpha.
 
 0.755
Caci_5356
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: swi:Swit_1850 acyl-CoA dehydrogenase domain- containing protein.
  
     0.754
Caci_2472
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: nca:Noca_1815 electron transfer flavoprotein beta-subunit.
 
 
 0.742
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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