STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_0646PFAM: Proline dehydrogenase; KEGG: sen:SACE_1978 proline dehydrogenase. (308 aa)    
Predicted Functional Partners:
Caci_0647
TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sen:SACE_1979 delta-1-pyrroline-5-carboxylate dehydrogenase precursor.
 0.990
Caci_7579
TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sgr:SGR_1988 putative aldehyde dehydrogenase.
 0.975
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.953
Caci_5915
PFAM: proline racemase; KEGG: sma:SAV_1730 proline racemase; Belongs to the proline racemase family.
    
 0.909
Caci_8354
PFAM: Proline dehydrogenase; KEGG: sen:SACE_1978 proline dehydrogenase.
  
  
 
0.903
Caci_1352
KEGG: sma:SAV_875 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold protein; Belongs to the peptidase S33 family.
     
  0.900
Caci_5407
KEGG: msm:MSMEG_2681 proline imino-peptidase; TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold protein; Belongs to the peptidase S33 family.
     
  0.900
Caci_8158
PFAM: alpha/beta hydrolase fold protein; KEGG: sgr:SGR_6815 putative hydrolase.
     
  0.900
Caci_1359
PFAM: Na+/solute symporter; KEGG: sco:SCO5229 permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.816
Caci_0304
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: fre:Franean1_6580 cytochrome bd ubiquinol oxidase subunit I.
  
 
 0.641
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.