STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_0750PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; Pyrrolo-quinoline quinone; KEGG: tfu:Tfu_1756 tyrosine protein kinase:serine/threonine protein kinase. (865 aa)    
Predicted Functional Partners:
Caci_0035
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: sgr:SGR_3728 putative protein phosphatase.
 
 
 0.839
Caci_5798
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: sma:SAV_4326 serine/threonine protein kinase.
  
     0.775
Caci_9039
SMART: serine/threonine protein kinase; KEGG: sco:SCO3893 hypothetical protein.
  
     0.774
Caci_0749
Hypothetical protein.
       0.773
Caci_3128
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain-containing protein.
 
 
 
 0.712
Caci_1854
KEGG: kinetoplast-associated protein-like protein.
  
     0.698
Caci_6001
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: sma:SAV_6092 serine/threonine protein kinase.
 
 
0.610
Caci_0748
KEGG: sco:SCO5108 integral membrane protein.
       0.537
Caci_0746
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: nfa:nfa56030 fumarate reductase iron-sulfur subunit.
  
    0.522
Caci_0747
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: saq:Sare_4150 succinate dehydrogenase flavoprotein subunit.
       0.511
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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