STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_0861PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (642 aa)    
Predicted Functional Partners:
Caci_6683
Cellulose 1,4-beta-cellobiosidase; KEGG: hau:Haur_2136 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase family 6.
 
 
 0.783
Caci_4881
PFAM: glycoside hydrolase family 6; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: sma:SAV_557 cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
 
 
 0.774
Caci_5221
PFAM: glycoside hydrolase family 3 domain protein; Ig domain protein group 2 domain protein; KEGG: ote:Oter_3219 beta-glucosidase.
  
 
 0.681
Caci_0862
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; SCP-like extracellular; KEGG: sgr:SGR_313 RNA polymerase ECF-subfamily sigma factor.
 
     0.680
Caci_1349
Beta-galactosidase; KEGG: sgr:SGR_371 putative beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
    
 0.677
Caci_2517
Beta-galactosidase; KEGG: sgr:SGR_1972 putative beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
    
 0.677
Caci_5333
Beta-galactosidase; KEGG: sco:SCO7558 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1.
    
 0.677
Caci_1609
Beta-glucosidase; KEGG: aba:Acid345_4061 beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; Carbohydrate binding family 6; Ig family protein; coagulation factor 5/8 type domain protein; SMART: cellulose binding type IV.
    
 0.669
Caci_3493
PFAM: glycoside hydrolase family 3 domain protein; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein; K05349 beta- glucosidase.
    
 0.669
Caci_3845
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; coagulation factor 5/8 type domain protein; KEGG: bam:Bamb_2459 beta-glucosidase.
    
 0.669
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.