Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_0078 | Caci_0558 | PFAM: aminoglycoside phosphotransferase; KEGG: sgr:SGR_3762 hypothetical protein. | KEGG: sco:SCO6025 hypothetical protein. | 0.687 |
Caci_0078 | Caci_1049 | PFAM: aminoglycoside phosphotransferase; KEGG: sgr:SGR_3762 hypothetical protein. | KEGG: sen:SACE_4642 hypothetical protein. | 0.559 |
Caci_0558 | Caci_0078 | KEGG: sco:SCO6025 hypothetical protein. | PFAM: aminoglycoside phosphotransferase; KEGG: sgr:SGR_3762 hypothetical protein. | 0.687 |
Caci_0558 | Caci_1049 | KEGG: sco:SCO6025 hypothetical protein. | KEGG: sen:SACE_4642 hypothetical protein. | 0.578 |
Caci_1049 | Caci_0078 | KEGG: sen:SACE_4642 hypothetical protein. | PFAM: aminoglycoside phosphotransferase; KEGG: sgr:SGR_3762 hypothetical protein. | 0.559 |
Caci_1049 | Caci_0558 | KEGG: sen:SACE_4642 hypothetical protein. | KEGG: sco:SCO6025 hypothetical protein. | 0.578 |
Caci_1049 | Caci_3357 | KEGG: sen:SACE_4642 hypothetical protein. | KEGG: cma:Cmaq_1265 hypothetical protein. | 0.585 |
Caci_1049 | Caci_3996 | KEGG: sen:SACE_4642 hypothetical protein. | KEGG: sco:SCO4460 hypothetical protein. | 0.592 |
Caci_1049 | Caci_4237 | KEGG: sen:SACE_4642 hypothetical protein. | KEGG: sco:SCO4460 hypothetical protein. | 0.588 |
Caci_1049 | Caci_4337 | KEGG: sen:SACE_4642 hypothetical protein. | PFAM: coagulation factor 5/8 type domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV; coagulation factor 5/8 type domain protein; Parallel beta-helix repeat; KEGG: sgr:SGR_474 putative secreted protein. | 0.564 |
Caci_1049 | Caci_5029 | KEGG: sen:SACE_4642 hypothetical protein. | KEGG: bfs:BF0474 hypothetical protein. | 0.585 |
Caci_1049 | Caci_5033 | KEGG: sen:SACE_4642 hypothetical protein. | PFAM: coagulation factor 5/8 type domain protein; KEGG: cma:Cmaq_0463 hypothetical protein. | 0.563 |
Caci_1049 | Caci_5777 | KEGG: sen:SACE_4642 hypothetical protein. | PFAM: import inner membrane translocase subunit Tim44; KEGG: LOC100092878; similar to epidermal cytokeratin 2. | 0.550 |
Caci_1049 | Caci_8021 | KEGG: sen:SACE_4642 hypothetical protein. | KEGG: sco:SCO6025 hypothetical protein. | 0.639 |
Caci_3357 | Caci_1049 | KEGG: cma:Cmaq_1265 hypothetical protein. | KEGG: sen:SACE_4642 hypothetical protein. | 0.585 |
Caci_3357 | Caci_3996 | KEGG: cma:Cmaq_1265 hypothetical protein. | KEGG: sco:SCO4460 hypothetical protein. | 0.580 |
Caci_3357 | Caci_4237 | KEGG: cma:Cmaq_1265 hypothetical protein. | KEGG: sco:SCO4460 hypothetical protein. | 0.580 |
Caci_3357 | Caci_4337 | KEGG: cma:Cmaq_1265 hypothetical protein. | PFAM: coagulation factor 5/8 type domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV; coagulation factor 5/8 type domain protein; Parallel beta-helix repeat; KEGG: sgr:SGR_474 putative secreted protein. | 0.707 |
Caci_3357 | Caci_5029 | KEGG: cma:Cmaq_1265 hypothetical protein. | KEGG: bfs:BF0474 hypothetical protein. | 0.731 |
Caci_3357 | Caci_5033 | KEGG: cma:Cmaq_1265 hypothetical protein. | PFAM: coagulation factor 5/8 type domain protein; KEGG: cma:Cmaq_0463 hypothetical protein. | 0.682 |
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