Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_1068 | Caci_1069 | PFAM: bifunctional deaminase-reductase domain protein; KEGG: saq:Sare_3935 deaminase-reductase domain- containing protein. | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | 0.520 |
Caci_1069 | Caci_1068 | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | PFAM: bifunctional deaminase-reductase domain protein; KEGG: saq:Sare_3935 deaminase-reductase domain- containing protein. | 0.520 |
Caci_1069 | Caci_3297 | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator transporter. | 0.456 |
Caci_1069 | Caci_4291 | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | PFAM: Phytanoyl-CoA dioxygenase; KEGG: swi:Swit_0319 phytanoyl-CoA dioxygenase. | 0.451 |
Caci_1069 | Caci_6654 | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | PFAM: major facilitator superfamily MFS_1; KEGG: mpa:MAP1632c hypothetical protein. | 0.726 |
Caci_1069 | Caci_7238 | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | PFAM: major facilitator superfamily MFS_1; KEGG: mbn:Mboo_0388 major facilitator transporter. | 0.671 |
Caci_3297 | Caci_1069 | PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator transporter. | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | 0.456 |
Caci_4291 | Caci_1069 | PFAM: Phytanoyl-CoA dioxygenase; KEGG: swi:Swit_0319 phytanoyl-CoA dioxygenase. | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | 0.451 |
Caci_6654 | Caci_1069 | PFAM: major facilitator superfamily MFS_1; KEGG: mpa:MAP1632c hypothetical protein. | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | 0.726 |
Caci_7238 | Caci_1069 | PFAM: major facilitator superfamily MFS_1; KEGG: mbn:Mboo_0388 major facilitator transporter. | PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_4760 transmembrane efflux protein. | 0.671 |