STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1104PFAM: aldo/keto reductase; KEGG: sco:SCO1569 oxidoreductase. (329 aa)    
Predicted Functional Partners:
Caci_1102
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: sco:SCO7072 hypothetical protein.
       0.685
Caci_1103
PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: hau:Haur_1528 phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
       0.655
Caci_1105
PFAM: Dak kinase; Dak phosphatase; KEGG: kra:Krad_4000 glycerone kinase.
       0.546
Caci_3212
PFAM: peptidase S45 penicillin amidase; coagulation factor 5/8 type domain protein; SMART: coagulation factor 5/8 type domain protein; KEGG: sma:SAV_6608 penicillin acylase.
  
     0.534
Caci_1100
PFAM: major intrinsic protein; KEGG: msm:MSMEG_2124 glycerol uptake facilitator, MIP channel; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.492
Caci_1101
KEGG: msm:MSMEG_2123 dihydroxyacetone kinase, DhaK subunit; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase.
       0.453
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.