STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1158PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: nfa:nfa52670 putative dehydrogenase. (338 aa)    
Predicted Functional Partners:
Caci_1160
PFAM: aldo/keto reductase; KEGG: mab:MAB_1528c oxidoreductase.
  
 
 0.697
Caci_5980
PFAM: aminoglycoside phosphotransferase; KEGG: stp:Strop_1563 aminoglycoside phosphotransferase.
 
    0.625
Caci_1157
PFAM: ThiJ/PfpI domain protein; KEGG: sma:SAV_4772 DJ-1/PfpI family transcriptional regulator.
 
    0.604
Caci_1149
PFAM: aminoglycoside phosphotransferase; KEGG: rha:RHA1_ro01502 hypothetical protein.
 
    0.598
Caci_1159
PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: nfa:nfa26040 hypothetical protein.
  
    0.502
Caci_1151
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rha:RHA1_ro02696 acyl-CoA dehydrogenase.
  
    0.475
Caci_3278
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sen:SACE_3735 alcohol dehydrogenase, zinc- binding.
 
  
 0.450
Caci_8688
PFAM: OsmC family protein; KEGG: sgr:SGR_6917 hypothetical protein.
    0.437
Caci_3481
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.430
Caci_2045
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rxy:Rxyl_2398 alcohol dehydrogenase, zinc- binding protein.
 
  
 0.420
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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