STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1316PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: saq:Sare_0798 serine/threonine protein kinase. (503 aa)    
Predicted Functional Partners:
Caci_0035
PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: sgr:SGR_3728 putative protein phosphatase.
 
 0.839
Caci_9039
SMART: serine/threonine protein kinase; KEGG: sco:SCO3893 hypothetical protein.
  
     0.775
Caci_8519
Serine/threonine protein kinase; PFAM: Fibronectin type III domain protein; SMART: serine/threonine protein kinase; Fibronectin type III domain protein; KEGG: similar to gamma-aminobutyric acid A receptor, epsilon.
  
     0.773
Caci_1854
KEGG: kinetoplast-associated protein-like protein.
  
     0.749
Caci_3128
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: fra:Francci3_1468 FHA domain-containing protein.
 
 
 
 0.703
Caci_3383
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: msm:MSMEG_1200 serine/threonine-protein kinase PknD.
 
    0.611
Caci_1315
TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: stp:Strop_2922 PhzF family phenazine biosynthesis protein.
       0.608
Caci_6001
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: sma:SAV_6092 serine/threonine protein kinase.
 
 
0.600
Caci_3829
PFAM: WD-40 repeat protein; SMART: WD-40 repeat protein; KEGG: fal:FRAAL1754 hypothetical protein.
 
    0.558
gatC
glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.537
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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