STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1777PFAM: iron permease FTR1; KEGG: fra:Francci3_3403 iron permease FTR1. (691 aa)    
Predicted Functional Partners:
Caci_1778
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.988
Caci_6261
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.973
Caci_7482
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.973
Caci_3900
Dyp-type peroxidase family; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.
 
  
 0.972
Caci_3064
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: sgr:SGR_3628 putative Dyp-type peroxidase family protein.
 
  
 0.971
Caci_4595
TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: sgr:SGR_771 putative Dyp-type peroxidase.
  
  
 0.889
Caci_3898
PFAM: iron permease FTR1; KEGG: fal:FRAAL1404 putative transmembrane protein.
 
 
0.839
Caci_3334
KEGG: mgi:Mflv_1080 extracellular solute-binding protein.
  
  
 0.806
Caci_4300
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_2555 ABC transporter related.
   
  
 0.784
Caci_8853
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sen:SACE_5745 iron ABC transporter ATP- binding protein.
   
  
 0.784
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.