Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_1827 | Caci_1828 | PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sma:SAV_6012 oxidoreductase. | PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: sgr:SGR_5323 putative NAD dependent epimerase/dehydratase family protein. | 0.585 |
Caci_1828 | Caci_1827 | PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: sgr:SGR_5323 putative NAD dependent epimerase/dehydratase family protein. | PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sma:SAV_6012 oxidoreductase. | 0.585 |
Caci_1828 | Caci_1829 | PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: sgr:SGR_5323 putative NAD dependent epimerase/dehydratase family protein. | KEGG: sen:SACE_1638 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein. | 0.587 |
Caci_1828 | Caci_1830 | PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: sgr:SGR_5323 putative NAD dependent epimerase/dehydratase family protein. | TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: sgr:SGR_5330 putative dihydrolipoamide dehydrogenase. | 0.468 |
Caci_1829 | Caci_1828 | KEGG: sen:SACE_1638 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein. | PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: sgr:SGR_5323 putative NAD dependent epimerase/dehydratase family protein. | 0.587 |
Caci_1829 | Caci_1830 | KEGG: sen:SACE_1638 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein. | TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: sgr:SGR_5330 putative dihydrolipoamide dehydrogenase. | 0.997 |
Caci_1830 | Caci_1828 | TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: sgr:SGR_5330 putative dihydrolipoamide dehydrogenase. | PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: sgr:SGR_5323 putative NAD dependent epimerase/dehydratase family protein. | 0.468 |
Caci_1830 | Caci_1829 | TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: sgr:SGR_5330 putative dihydrolipoamide dehydrogenase. | KEGG: sen:SACE_1638 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein. | 0.997 |