STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_1893PFAM: DSBA oxidoreductase; KEGG: sma:SAV_6393 protein dithiol-disulfide isomerase. (238 aa)    
Predicted Functional Partners:
Caci_2640
PFAM: arsenate reductase and related; KEGG: sco:SCO2206 hypothetical protein; Belongs to the ArsC family.
   
 
 0.722
Caci_4508
PFAM: arsenate reductase and related; KEGG: sco:SCO2206 hypothetical protein; Belongs to the ArsC family.
   
 
 0.722
Caci_1892
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: sma:SAV_2033 LuxR family transcriptional regulator.
  
    0.487
Caci_7351
PFAM: OsmC family protein; KEGG: nca:Noca_1377 OsmC family protein.
 
   
 0.449
Caci_7353
PFAM: globin; KEGG: ace:Acel_1609 globin.
 
  
 0.441
Caci_0568
PFAM: NADPH-dependent FMN reductase; KEGG: sgr:SGR_3807 putative NAD(P)H-dependent FMN reductase.
 
    0.438
Caci_4303
PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: sma:SAV_1207 NAD(P)H-dependent FMN reductase.
 
    0.435
Caci_0968
PFAM: NADPH-dependent FMN reductase; KEGG: fra:Francci3_1652 NADPH-dependent FMN reductase.
 
    0.419
Caci_2190
PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: dar:Daro_2073 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase.
 
    0.418
Caci_2143
PFAM: protein of unknown function DUF1349; KEGG: cmi:CMM_2383 hypothetical protein.
 
     0.414
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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