Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_1910 | Caci_1911 | KEGG: rha:RHA1_ro01700 glycine rich protein. | KEGG: syg:sync_2411 hypothetical protein. | 0.466 |
Caci_1910 | Caci_1912 | KEGG: rha:RHA1_ro01700 glycine rich protein. | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | 0.403 |
Caci_1910 | Caci_1913 | KEGG: rha:RHA1_ro01700 glycine rich protein. | Hypothetical protein. | 0.403 |
Caci_1911 | Caci_1910 | KEGG: syg:sync_2411 hypothetical protein. | KEGG: rha:RHA1_ro01700 glycine rich protein. | 0.466 |
Caci_1911 | Caci_1912 | KEGG: syg:sync_2411 hypothetical protein. | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | 0.651 |
Caci_1911 | Caci_1913 | KEGG: syg:sync_2411 hypothetical protein. | Hypothetical protein. | 0.651 |
Caci_1912 | Caci_1910 | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | KEGG: rha:RHA1_ro01700 glycine rich protein. | 0.403 |
Caci_1912 | Caci_1911 | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | KEGG: syg:sync_2411 hypothetical protein. | 0.651 |
Caci_1912 | Caci_1913 | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | Hypothetical protein. | 0.773 |
Caci_1913 | Caci_1910 | Hypothetical protein. | KEGG: rha:RHA1_ro01700 glycine rich protein. | 0.403 |
Caci_1913 | Caci_1911 | Hypothetical protein. | KEGG: syg:sync_2411 hypothetical protein. | 0.651 |
Caci_1913 | Caci_1912 | Hypothetical protein. | TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mab:MAB_0560 hypothetical protein. | 0.773 |