STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_2109PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_5276 putative maltose ABC transporter permease protein. (312 aa)    
Predicted Functional Partners:
Caci_2110
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO2229 maltose permease.
 0.996
Caci_2108
PFAM: extracellular solute-binding protein family 1; KEGG: saq:Sare_0747 extracellular solute-binding protein.
 0.986
Caci_5854
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0830 multiple sugar transport system permease protein.
 0.983
Caci_3206
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_3962 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.954
Caci_8165
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sma:SAV_3962 ABC transporter ATP-binding protein.
 
 0.954
Caci_3093
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: art:Arth_0750 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.942
Caci_2154
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ace:Acel_0558 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 0.935
Caci_1719
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ttj:TTHA0975 sugar ABC transporter, ATP- binding protein.
 
 0.920
Caci_5855
Fructose-bisphosphate aldolase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0831 multiple sugar transport system permease protein.
  
  
 
0.909
Caci_5856
PFAM: extracellular solute-binding protein family 1; KEGG: tfu:Tfu_0832 multiple sugar transport system substrate-binding protein.
  
 0.901
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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