STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_2497Serine/threonine protein kinase; PFAM: Lanthionine synthetase C family protein; SMART: serine/threonine protein kinase; KEGG: sen:SACE_4613 hypothetical protein. (880 aa)    
Predicted Functional Partners:
Caci_3017
KEGG: sma:SAP1p60 hypothetical protein.
  
    0.687
Caci_5747
KEGG: reh:H16_B1353 insecticidal toxin complex protein.
 
  
 0.617
Caci_2496
Hypothetical protein.
       0.543
Caci_0078
PFAM: aminoglycoside phosphotransferase; KEGG: sgr:SGR_3762 hypothetical protein.
  
     0.527
Caci_4460
PFAM: Vault protein inter-alpha-trypsin domain protein; von Willebrand factor type A; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; KEGG: mmi:MMAR_3543 hypothetical protein.
  
     0.505
Caci_0103
FHA domain containing protein; PFAM: Forkhead-associated protein; protein of unknown function DUF1707; SMART: Forkhead-associated protein; KEGG: sma:SAV_2158 hypothetical protein.
 
 
   0.504
Caci_4588
PFAM: Protein of unknown function DUF1963; KEGG: cco:CCC13826_0556 peptide methionine sulfoxide reductase MsrA/MsrB.
  
     0.501
Caci_0558
KEGG: sco:SCO6025 hypothetical protein.
  
     0.477
Caci_7141
PFAM: coagulation factor 5/8 type domain protein; KEGG: sgr:SGR_5535 hypothetical protein.
  
   0.438
Caci_1563
KEGG: sen:SACE_1148 hypothetical protein.
 
 
 0.434
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.