STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_2719KEGG: hypothetical protein. (164 aa)    
Predicted Functional Partners:
Caci_2714
PFAM: sodium/hydrogen exchanger; KEGG: fal:FRAAL1809 Na+/H+ antiporter.
       0.773
Caci_2715
PFAM: FAD dependent oxidoreductase; KEGG: sen:SACE_2961 fructosyl-amino acid oxidase, putative.
       0.773
Caci_2716
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hsl:OE1807R threonine synthase.
       0.773
Caci_2717
PFAM: AMP-dependent synthetase and ligase; KEGG: fra:Francci3_4204 AMP-dependent synthetase and ligase.
       0.773
Caci_2718
KEGG: mav:MAV_1395 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase.
       0.773
Caci_2720
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sen:SACE_5381 putative 3-oxoacyl-[acyl- carrier protein] reductase.
       0.773
Caci_2721
PFAM: MbtH domain protein; KEGG: cvi:CV_2232 MbtH-like protein.
       0.773
Caci_2722
PFAM: cytochrome P450; KEGG: sgr:SGR_3267 putative cytochrome P450.
       0.639
Caci_2723
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: bbt:BBta_4110 putative non-ribosomal peptide synthase.
       0.639
Caci_2713
PFAM: conserved hypothetical protein; KEGG: mhu:Mhun_1736 hypothetical protein.
       0.559
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.