STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_2755PFAM: protein of unknown function DUF1684; KEGG: aau:AAur_3731 putative protein of unknown function (DUF1684). (272 aa)    
Predicted Functional Partners:
Caci_3765
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: sma:SAV_7210 ABC transporter substrate- binding protein.
 
     0.545
Caci_3796
KEGG: sma:SAV_7212 FMNH2-utilizing oxygenase.
 
     0.525
Caci_2754
PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: sma:SAV_3894 integral membrane efflux protein.
       0.499
Caci_3795
KEGG: sma:SAV_7213 FMNH2-utilizing oxygenase.
 
     0.483
Caci_1922
PFAM: band 7 protein; SMART: band 7 protein; KEGG: fre:Franean1_0106 band 7 protein.
     
 0.480
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.