STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_3206PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_3962 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (364 aa)    
Predicted Functional Partners:
Caci_5854
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_0830 multiple sugar transport system permease protein.
 
 0.989
Caci_7199
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_3020 sugar ABC transporter permease protein.
 0.971
Caci_7719
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_3020 sugar ABC transporter permease protein.
 0.970
Caci_2110
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO2229 maltose permease.
 
 0.961
Caci_0889
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_1707 binding-protein-dependent transport systems inner membrane component.
 
 0.957
Caci_2109
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_5276 putative maltose ABC transporter permease protein.
 
 0.954
Caci_4319
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2918 ABC-type sugar transport system, permease component.
 
 0.951
Caci_3588
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cmi:CMM_0297 putative sugar ABC transporter, permease component.
 
 0.947
Caci_7720
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ace:Acel_0553 binding-protein-dependent transport systems inner membrane component.
 
 0.946
Caci_1599
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_0771 binding-protein-dependent transport systems inner membrane component.
 
 0.943
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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