STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_3290TIGRFAM: esterase, PHB depolymerase family; KEGG: tfu:Tfu_0082 esterase, PHB depolymerase. (450 aa)    
Predicted Functional Partners:
Caci_4414
PFAM: glycoside hydrolase family 10; cellulose- binding family II; SMART: glycoside hydrolase family 10; cellulose- binding family II; KEGG: ace:Acel_0180 glycoside hydrolase family protein.
 
   0.675
Caci_4905
PFAM: Ricin B lectin; glycoside hydrolase family 62; SMART: Ricin B lectin; KEGG: cja:CJA_3282 ferruloyl esterase, putative, fee1B.
 
     0.647
Caci_4928
PFAM: glycoside hydrolase family 10; Ricin B lectin; SMART: glycoside hydrolase family 10; Ricin B lectin; KEGG: ace:Acel_0180 glycoside hydrolase family protein.
 
   0.625
Caci_3603
PFAM: cellulose-binding family II; glycoside hydrolase family 12; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: ace:Acel_0619 cellulose-binding family II protein.
 
     0.599
Caci_4288
PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: sco:SCO5786 secreted hydrolase.
 
     0.574
Caci_6683
Cellulose 1,4-beta-cellobiosidase; KEGG: hau:Haur_2136 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase family 6.
  
     0.566
Caci_4884
PFAM: glycoside hydrolase family 62; Ricin B lectin; SMART: Ricin B lectin; KEGG: sco:SCO5932 arabinofuranosidase.
 
   0.557
Caci_4941
PFAM: glycoside hydrolase family 11; Ricin B lectin; SMART: Ricin B lectin; KEGG: sco:SCO2292 secreted endo-1,4-beta-xylanase B (xylanase B); Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.552
Caci_6682
PFAM: cellulose-binding family II; glycosyl hydrolase BNR repeat-containing protein; SMART: cellulose-binding family II; KEGG: sco:SCO6545 secreted cellulase.
  
     0.551
Caci_4881
PFAM: glycoside hydrolase family 6; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: sma:SAV_557 cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
 
     0.538
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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