STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_3769PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: sgr:SGR_5753 putative ABC transporter substrate-binding protein. (323 aa)    
Predicted Functional Partners:
Caci_3798
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_3966 amino acid ABC transporter, permease protein.
 
 
 0.870
Caci_3767
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_7208 ABC transporter permease protein.
 
 
 0.869
Caci_7702
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL5987 amino acid ABC transporter membrane protein.
 
 
 0.869
Caci_3799
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sen:SACE_3965 putative ABC transporter ATP- binding protein.
 
 
 0.867
Caci_7703
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5258 ATP-binding protein.
 
 
 0.864
Caci_3766
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_7209 ABC transporter ATP-binding protein.
 
 
 0.861
Caci_2777
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_6281 ABC transporter ATP-binding protein - glutamine transport.
 
 
 0.764
Caci_2776
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nca:Noca_4574 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.756
Caci_3770
Hypothetical protein.
       0.495
Caci_5702
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: sgr:SGR_5483 putative glutamate synthase (NADPH) large subunit.
  
  
 0.470
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.