STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_3914PFAM: HpcH/HpaI aldolase; KEGG: pde:Pden_3272 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family. (283 aa)    
Predicted Functional Partners:
Caci_1018
PFAM: Aldehyde Dehydrogenase; KEGG: sma:SAV_5016 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.910
Caci_1995
PFAM: Aldehyde Dehydrogenase; KEGG: nca:Noca_4004 succinic semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.910
Caci_4403
PFAM: Aldehyde Dehydrogenase; KEGG: aau:AAur_0653 putative succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.910
Caci_3917
KEGG: reu:Reut_A1475 hypothetical protein.
 
    0.811
Caci_3913
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bxe:Bxe_B1056 hypothetical protein.
       0.774
Caci_3918
KEGG: bja:blr3843 hypothetical protein.
 
    0.767
Caci_3919
KEGG: pde:Pden_3273 hypothetical protein.
 
    0.705
Caci_3915
PFAM: amidohydrolase 2; KEGG: mrd:Mrad2831_5915 amidohydrolase 2.
 
     0.655
Caci_3916
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rxy:Rxyl_2271 thiamine pyrophosphate enzyme- like TPP binding region; Belongs to the TPP enzyme family.
       0.614
Caci_3920
PFAM: amidohydrolase 2; KEGG: pde:Pden_3277 amidohydrolase 2.
 
     0.592
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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