Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Caci_4383 | Caci_4384 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | 0.924 |
Caci_4383 | Caci_4385 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | KEGG: sco:SCO4251 secreted protein. | 0.934 |
Caci_4383 | Caci_4386 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | KEGG: sgr:SGR_2069 hypothetical protein. | 0.678 |
Caci_4383 | Caci_4387 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | Hypothetical protein; KEGG: proteophosphoglycan 5. | 0.558 |
Caci_4383 | Caci_4388 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4248 hypothetical protein. | 0.994 |
Caci_4383 | Caci_4389 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | PFAM: Peptidoglycan-binding LysM; KEGG: sco:SCO4247 hypothetical protein. | 0.992 |
Caci_4383 | Caci_4390 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: sco:SCO4246 hypothetical protein. | 0.924 |
Caci_4383 | Caci_4391 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | PFAM: GPW/gp25 family protein; KEGG: sco:SCO4245 hypothetical protein. | 0.999 |
Caci_4383 | Caci_4392 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | KEGG: sco:SCO4244 hypothetical protein. | 0.996 |
Caci_4383 | Caci_4393 | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | TIGRFAM: phage tail protein; KEGG: sco:SCO4243 secreted protein. | 0.996 |
Caci_4384 | Caci_4383 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | PFAM: tail sheath protein; KEGG: sco:SCO4253 hypothetical protein. | 0.924 |
Caci_4384 | Caci_4385 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | KEGG: sco:SCO4251 secreted protein. | 0.960 |
Caci_4384 | Caci_4386 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | KEGG: sgr:SGR_2069 hypothetical protein. | 0.832 |
Caci_4384 | Caci_4387 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | Hypothetical protein; KEGG: proteophosphoglycan 5. | 0.762 |
Caci_4384 | Caci_4388 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4248 hypothetical protein. | 0.922 |
Caci_4384 | Caci_4389 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | PFAM: Peptidoglycan-binding LysM; KEGG: sco:SCO4247 hypothetical protein. | 0.918 |
Caci_4384 | Caci_4390 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: sco:SCO4246 hypothetical protein. | 0.918 |
Caci_4384 | Caci_4391 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | PFAM: GPW/gp25 family protein; KEGG: sco:SCO4245 hypothetical protein. | 0.924 |
Caci_4384 | Caci_4392 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | KEGG: sco:SCO4244 hypothetical protein. | 0.924 |
Caci_4384 | Caci_4393 | TIGRFAM: conserved hypothetical protein; KEGG: sco:SCO4252 hypothetical protein. | TIGRFAM: phage tail protein; KEGG: sco:SCO4243 secreted protein. | 0.917 |
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