STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_4406PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll5401 hypothetical protein. (132 aa)    
Predicted Functional Partners:
Caci_4825
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sen:SACE_1245 cell wall protein.
  
     0.762
Caci_4405
Hypothetical protein.
  
    0.618
Caci_0686
KEGG: sco:SCO7296 hypothetical protein.
  
     0.493
Caci_4404
Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)); PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sma:SAV_3870 malate dehydrogenase.
     
 0.484
Caci_0285
KEGG: rha:RHA1_ro02601 hypothetical protein.
  
     0.443
Caci_7111
PFAM: nitroreductase; KEGG: saq:Sare_0515 nitroreductase.
 
    0.441
Caci_1713
KEGG: bcm:Bcenmc03_7025 zinc finger UBP-type protein.
  
     0.425
nuoI
4Fe-4S ferredoxin iron-sulfur binding domain protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.414
Caci_7459
KEGG: sma:SAV_5907 hypothetical protein.
  
    0.414
nuoI-2
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.414
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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