STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Caci_4683PFAM: glycoside hydrolase family 31; KEGG: hau:Haur_1246 alpha-xylosidase YicI; Belongs to the glycosyl hydrolase 31 family. (771 aa)    
Predicted Functional Partners:
Caci_3599
PFAM: glycoside hydrolase family 43; KEGG: sco:SCO0118 xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.616
Caci_4935
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: sma:SAV_2573 beta-galactosidase.
 
  
 0.581
Caci_4676
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; KEGG: sco:SCO5689 beta-galactosidase.
 
  
 0.567
Caci_2028
Beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein; KEGG: sen:SACE_5154 putative beta-galactosidase.
 
  
 0.548
Caci_2783
PFAM: extracellular solute-binding protein family 1; KEGG: hau:Haur_1243 extracellular solute-binding protein.
 
  
 0.542
Caci_6971
PFAM: extracellular solute-binding protein family 1; KEGG: hau:Haur_1243 extracellular solute-binding protein.
 
  
 0.537
Caci_4940
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: sma:SAV_2578 sugar hydrolase.
 
   
 0.526
Caci_3590
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: cmi:CMM_0310 hypothetical protein.
 
   
 0.517
Caci_4317
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: sco:SCO2431 alpha-L-arabinofuranosidase.
 
   
 0.515
Caci_4677
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sma:SAV_2578 sugar hydrolase.
 
   
 0.513
Your Current Organism:
Catenulispora acidiphila
NCBI taxonomy Id: 479433
Other names: C. acidiphila DSM 44928, Catenulispora acidiphila DSM 44928, Catenulispora acidiphila str. DSM 44928, Catenulispora acidiphila strain DSM 44928
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